Transcript: LINC00596:2

Basic information

LNCipedia transcript ID: LINC00596:2 
LNCipedia gene ID: LINC00596
Location (hg38): chr14:23922250-23934568
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 942 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT035951
Alternative gene names: CNSLT1I7G


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -186.0859 non-coding 
CPAT coding probability 2.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00596:2 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NRL-2:2
4.0 LINC00596:2
4.1 LINC00596:2
5.0 LINC00596:2
5.1 LINC00596:2
5.2 LINC00596:2