Transcript: LINC00608:13

Basic information

LNCipedia transcript ID: LINC00608:13 
LNCipedia gene ID: LINC00608
RefSeq ID: NR_024385
Location (hg38): chr2:218976284-218977922
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1556 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT076972; NR_024385; NR_024385.1
Alternative gene names: ; LINC00608


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -49.7738 non-coding 
CPAT coding probability 16.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00608:13 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDK5R2-1:12
4.0 LINC00608:13
4.1 LINC00608:13
5.0 LINC00608:13
5.1 LINC00608:13
5.2 LINC00608:13