Transcript: LINC00608:4

Basic information

LNCipedia transcript ID: LINC00608:4 
LNCipedia gene ID: LINC00608
Location (hg38): chr2:218975630-218977921
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1972 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT076965; ENST00000419101.2
Alternative gene names: ENSG00000236445.2; LINC00608;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -49.7738 non-coding 
CPAT coding probability 15.77% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00608:4 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CDK5R2-1:10
4.0 LINC00608:4
4.1 LINC00608:4
5.0 LINC00608:4
5.1 LINC00608:4
5.2 LINC00608:4