Transcript: LINC00608:5

Basic information

LNCipedia transcript ID: LINC00608:5 
LNCipedia gene ID: LINC00608
Location (hg38): chr2:218975673-218977987
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 583 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00005019; NONHSAT076966
Alternative gene names: XLOC_001866; linc-FAM134A;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.1308 non-coding 
CPAT coding probability 1.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00608:5 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CDK5R2-1:2
3.1 lnc-CDK5R2-1:2
4.0 LINC00608:5
4.1 LINC00608:5
5.0 LINC00608:5
5.1 LINC00608:5
5.2 LINC00608:5