Transcript: LINC00615:2

Basic information

LNCipedia transcript ID: LINC00615:2 
LNCipedia gene ID: LINC00615
Location (hg38): chr12:90938656-90948669
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1392 bp
Exons: 5
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000359455; ENST00000359455.3; LINC00615-201
Alternative gene names: ENSG00000196243; RP11-916O13.1; ENSG00000196243.4; LINC00615; OTTHUMG00000170071.2; FLJ25378


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.3726 non-coding 
CPAT coding probability 18.51% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00615:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CLLU1.1-7:2
3.1 lnc-CLLU1.1-7:2
4.0 LINC00615:2
4.1 LINC00615:2
5.0 LINC00615:2
5.1 LINC00615:2
5.2 LINC00615:2