Transcript: LINC00622:2

Basic information

LNCipedia transcript ID: LINC00622:2 
HGNC Gene Symbol: LINC00622    
HGNC Full Gene Name: long intergenic non-protein coding RNA 622
Ensembl Gene ID: ENSG00000260941
Ensembl Transcript ID: ENST00000562811
Location (hg38): chr1:119597702-119599271
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1570 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000562811.1; RP4-599G15.7-001; OTTHUMT00000431421.1
Alternative gene names: ENSG00000260941.1; RP4-599G15.7; OTTHUMG00000176048.1; LINC00622;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.0487 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00622:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF697-1:1
4.0 LINC00622:2
4.1 LINC00622:2
5.0 LINC00622:2
5.1 LINC00622:2
5.2 LINC00622:2