Transcript: LINC00624:2

Basic information

LNCipedia transcript ID: LINC00624:2 
HGNC Gene Symbol: LINC00624    
HGNC Full Gene Name: long intergenic non-protein coding RNA 624
Ensembl Gene ID: ENSG00000278811
Ensembl Transcript ID: ENST00000619867
Location (hg38): chr1:147258885-147517875
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3088 bp
Exons: 6
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000619867.4
Alternative gene names: ENSG00000278811.4; LINC00624


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.74% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00624:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC00624:2
5.1 LINC00624:2
5.2 LINC00624:2