Transcript: LINC00626:2

Basic information

LNCipedia transcript ID: LINC00626:2 
LNCipedia gene ID: LINC00626
Location (hg38): chr1:168786941-168792882
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 949 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00000008
Alternative gene names: XLOC_000455; linc-ATP1B1-3; MGC4473


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -144.0963 non-coding 
CPAT coding probability 1.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00626:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-XCL1-1:2
3.1 lnc-XCL1-1:2
4.0 LINC00626:2
4.1 LINC00626:2
5.0 LINC00626:2
5.1 LINC00626:2
5.2 LINC00626:2