Transcript: LINC00626:4

Basic information

LNCipedia transcript ID: LINC00626:4 
LNCipedia gene ID: LINC00626
Location (hg38): chr1:168786949-168788873
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 359 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001190; NONHSAT007445
Alternative gene names: XLOC_000455; linc-ATP1B1-3; MGC4473


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -144.0963 non-coding 
CPAT coding probability 1.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00626:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-XCL1-1:3
3.1 lnc-XCL1-1:3
4.0 LINC00626:4
4.1 LINC00626:4
5.0 LINC00626:4
5.1 LINC00626:4
5.2 LINC00626:4