Transcript: LINC00632:10

Basic information

LNCipedia transcript ID: LINC00632:10 
LNCipedia gene ID: LINC00632
Location (hg38): chrX:140764560-140775283
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3250 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017253; NONHSAT138814
Alternative gene names: XLOC_008079; linc-SPANXB1-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.9174 non-coding 
CPAT coding probability 14.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00632:10 no no no no

Available literature

  1. Li (2014), Non-coding RNAs and gastric cancer., World J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP1-177G6.2.1-1:1
3.1 lnc-RP1-177G6.2.1-1:1
4.0 LINC00632:10
4.1 LINC00632:10
5.0 LINC00632:10
5.1 LINC00632:10
5.2 LINC00632:10