Transcript: LINC00632:11

Basic information

LNCipedia transcript ID: LINC00632:11 
HGNC Gene Symbol: LINC00632    
HGNC Full Gene Name: long intergenic non-protein coding RNA 632
Ensembl Gene ID: ENSG00000203930
Ensembl Transcript ID: ENST00000602535
Location (hg38): chrX:140764578-140772679
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 723 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT147756; ENST00000602535.1
Alternative gene names: ENSG00000203930.10; LINC00632;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -103.6975 non-coding 
CPAT coding probability 4.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00632:11 no no no no

Available literature

  1. Li (2014), Non-coding RNAs and gastric cancer., World J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP1-177G6.2.1-1:10
4.0 LINC00632:11
4.1 LINC00632:11
5.0 LINC00632:11
5.1 LINC00632:11
5.2 LINC00632:11