Transcript: LINC00632:12

Basic information

LNCipedia transcript ID: LINC00632:12 
LNCipedia gene ID: LINC00632
Location (hg38): chrX:140764586-140772580
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 616 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00017468
Alternative gene names: XLOC_008079; linc-SPANXB1-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -363.9405 non-coding 
CPAT coding probability 4.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00632:12 no no no no

Available literature

  1. Li (2014), Non-coding RNAs and gastric cancer., World J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP1-177G6.2.1-1:2
3.1 lnc-RP1-177G6.2.1-1:2
4.0 LINC00632:12
4.1 LINC00632:12
5.0 LINC00632:12
5.1 LINC00632:12
5.2 LINC00632:12