Transcript: LINC00642:12

Basic information

LNCipedia transcript ID: LINC00642:12 
LNCipedia gene ID: LINC00642
Location (hg38): chr14:90456228-90458951
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1100 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT039230
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -97.7286 non-coding 
CPAT coding probability 14.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00642:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CALM1-1:14
4.0 LINC00642:12
4.1 LINC00642:12
5.0 LINC00642:12
5.1 LINC00642:12
5.2 LINC00642:12