Transcript: LINC00649:35

Basic information

LNCipedia transcript ID: LINC00649:35 
LNCipedia gene ID: LINC00649
Location (hg38): chr21:33948605-33969590
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 761 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237945.3|ENST00000593977.1
Alternative gene names: TCONS_00028768


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -250.7413 non-coding 
CPAT coding probability 1.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00649:35 no no no no

Available literature

  1. Liu (2015), Expression Signatures of Long Noncoding RNAs in Adolescent Idiopathic Scoliosis., Biomed Res Int


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00649:35
5.0 LINC00649:35
5.1 LINC00649:35
5.2 LINC00649:35