Transcript: LINC00658:2

Basic information

LNCipedia transcript ID: LINC00658:2 
LNCipedia gene ID: LINC00658
Location (hg38): chr20:5464696-5471034
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 244 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028304; NONHSAT078334
Alternative gene names: XLOC_013641; linc-PROKR2-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.2805 non-coding 
CPAT coding probability 1.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00658:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GPCPD1-2:1
3.1 lnc-GPCPD1-2:1
4.0 LINC00658:2
4.1 LINC00658:2
5.0 LINC00658:2
5.1 LINC00658:2
5.2 LINC00658:2