Transcript: LINC00659:16

Basic information

LNCipedia transcript ID: LINC00659:16 
LNCipedia gene ID: LINC00659
Ensembl Gene ID: ENSG00000223669
Ensembl Transcript ID: ENST00000430184
Location (hg38): chr20:62732566-62735347
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 739 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000430184.1; RP11-93B14.4-001; OTTHUMT00000080051.1
Alternative gene names: ENSG00000223669.1; RP11-93B14.4; OTTHUMG00000032924.1; ; AL357033.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.5177 non-coding 
CPAT coding probability 72.54% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00659:16 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-93B14.6.1-5:1
4.0 lnc-RP11-93B14.6.1-5:1
4.1 LINC00659:16
5.0 LINC00659:16
5.1 LINC00659:16
5.2 LINC00659:16