Transcript: LINC00659:2

Basic information

LNCipedia transcript ID: LINC00659:2 
LNCipedia gene ID: LINC00659
Location (hg38): chr20:62773905-62776885
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 910 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028463; NONHSAT080779
Alternative gene names: XLOC_013837; linc-GATA5-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.2452 non-coding 
CPAT coding probability 5.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00659:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TCFL5-2:2
3.1 lnc-TCFL5-3:2
4.0 LINC00659:2
4.1 LINC00659:2
5.0 LINC00659:2
5.1 LINC00659:2
5.2 LINC00659:2