Transcript: LINC00661:20

Basic information

LNCipedia transcript ID: LINC00661:20 
LNCipedia gene ID: LINC00661
Location (hg38): chr19:16022630-16024944
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 805 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT061656
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 25.0137 non-coding 
CPAT coding probability 15.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00661:20 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TPM4-2:24
4.0 LINC00661:20
4.1 LINC00661:20
5.0 LINC00661:20
5.1 LINC00661:20
5.2 LINC00661:20