Transcript: LINC00663:11

Basic information

LNCipedia transcript ID: LINC00663:11 
LNCipedia gene ID: LINC00663
Location (hg38): chr19:19756376-19776380
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2080 bp
Exons: 5
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000434276; NONHSAT063581
Alternative gene names: ENSG00000228642; AC011477.1; MGC39821


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.8512 non-coding 
CPAT coding probability 64.17% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00663:11 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF506-1:2
3.1 lnc-ZNF506-1:2
4.0 LINC00663:11
4.1 LINC00663:11
5.0 LINC00663:11
5.1 LINC00663:11
5.2 LINC00663:11