Transcript: LINC00664:9

Basic information

LNCipedia transcript ID: LINC00664:9 
HGNC Gene Symbol: LINC00664    
HGNC Full Gene Name: long intergenic non-protein coding RNA 664
Ensembl Gene ID: ENSG00000268658
Ensembl Transcript ID: ENST00000596203
Location (hg38): chr19:21494285-21499893
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1742 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000500999; ENST00000596203.1
Alternative gene names: ENSG00000248094; ENSG00000268658.1; LINC00664; ENSG00000268658.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.2607 non-coding 
CPAT coding probability 0.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00664:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF429-1:3
3.1 lnc-ZNF429-1:3
4.0 LINC00664:9
4.1 LINC00664:9
5.0 LINC00664:9
5.1 LINC00664:9
5.2 LINC00664:9