Transcript: LINC00668:10

Basic information

LNCipedia transcript ID: LINC00668:10 
HGNC Gene Symbol: LINC00668    
HGNC Full Gene Name: long intergenic non-protein coding RNA 668
Ensembl Gene ID: ENSG00000265933
Ensembl Transcript ID: ENST00000583316
Location (hg38): chr18:6927308-6929805
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 582 bp
Exons: 5
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000583316.1; RP11-146G7.3-006; OTTHUMT00000443726.1; NONHSAT057134; ENST00000583316.5
Alternative gene names: ENSG00000265933.1; RP11-146G7.3; OTTHUMG00000178875.1; LINC00668; ENSG00000265933.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -124.5368 non-coding 
CPAT coding probability 5.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00668:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LAMA1-1:6
4.0 LINC00668:10
4.1 LINC00668:10
5.0 LINC00668:10
5.1 LINC00668:10
5.2 LINC00668:10