Transcript: LINC00670:2

Basic information

LNCipedia transcript ID: LINC00670:2 
LNCipedia gene ID: LINC00670
RefSeq ID: NR_034145
Location (hg38): chr17:12549968-12637187
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2767 bp
Exons: 4
Sources: Broad Institute; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00025100; NR_034145; NR_034145.1
Alternative gene names: XLOC_012113; linc-MYOCD; FLJ34690; LINC00670


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.5832 non-coding 
CPAT coding probability 22.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00670:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MYOCD-1:1
3.1 lnc-MYOCD-2:2
4.0 LINC00670:2
4.1 LINC00670:2
5.0 LINC00670:2
5.1 LINC00670:2
5.2 LINC00670:2