Transcript: LINC00681:1

Basic information

LNCipedia transcript ID: LINC00681:1 
HGNC Gene Symbol: LINC00681    
HGNC Full Gene Name: long intergenic non-protein coding RNA 681
Ensembl Gene ID: ENSG00000255494
Ensembl Transcript ID: ENST00000530150
RefSeq ID: NR_102423
Location (hg38): chr8:12794243-12818291
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 504 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000530150; ENST00000530150.1; KIAA1456-001; OTTHUMT00000384374.1; NONHSAT125183; NR_102423; NR_102423.1
Alternative gene names: ENSG00000255494; KIAA1456; ENSG00000255494.1; OTTHUMG00000129516.3; LINC00681;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -168.2169 non-coding 
CPAT coding probability 2.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00681:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIAA1456.1-2:1
3.1 lnc-KIAA1456.1-2:1
4.0 LINC00681:1
4.1 LINC00681:1
5.0 LINC00681:1
5.1 LINC00681:1
5.2 LINC00681:1