Transcript: LINC00683:6

Basic information

LNCipedia transcript ID: LINC00683:6 
LNCipedia gene ID: LINC00683
Location (hg38): chr18:76622119-76623383
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 845 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00026378; NONHSAT059943
Alternative gene names: XLOC_012728; linc-ZNF236-2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -174.6392 non-coding 
CPAT coding probability 3.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00683:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-17M16.1.1-3:4
3.1 lnc-RP11-17M16.1.1-5:5
4.0 LINC00683:6
4.1 LINC00683:6
5.0 LINC00683:6
5.1 LINC00683:6
5.2 LINC00683:6