Transcript: LINC00689:9

Basic information

LNCipedia transcript ID: LINC00689:9 
LNCipedia gene ID: LINC00689
Location (hg38): chr7:159019461-159021756
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1472 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00013663; NONHSAT124558
Alternative gene names: XLOC_006322; ;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.2906 non-coding 
CPAT coding probability 3.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00689:9 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WDR60-4:8
3.1 lnc-WDR60-4:8
4.0 LINC00689:9
4.1 LINC00689:9
5.0 LINC00689:9
5.1 LINC00689:9
5.2 LINC00689:9