Transcript: LINC00698:6

Basic information

LNCipedia transcript ID: LINC00698:6 
HGNC Gene Symbol: LINC00698    
HGNC Full Gene Name: long intergenic non-protein coding RNA 698
Ensembl Gene ID: ENSG00000244342
Ensembl Transcript ID: ENST00000468072
Location (hg38): chr3:62950471-63125062
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1957 bp
Exons: 9
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000468072; ENST00000468072.1; RP11-129K20.2-001; OTTHUMT00000351800.1; NONHSAT090198
Alternative gene names: ENSG00000244342; RP11-129K20.2; ENSG00000244342.1; OTTHUMG00000158701.1; LINC00698; ENSG00000244342.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.5842 non-coding 
CPAT coding probability 18.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00698:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SYNPR-2:3
3.1 lnc-SYNPR-2:4
4.0 LINC00698:6
4.1 LINC00698:6
5.0 LINC00698:6
5.1 LINC00698:6
5.2 LINC00698:6