Transcript: LINC00702:5

Basic information

LNCipedia transcript ID: LINC00702:5 
HGNC Gene Symbol: LINC00702    
HGNC Full Gene Name: long intergenic non-protein coding RNA 702
Ensembl Gene ID: ENSG00000233117
Ensembl Transcript ID: ENST00000454470
Location (hg38): chr10:4235560-4243643
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 363 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00017906; ENST00000454470; ENST00000454470.1; RP11-67B16.1-002; OTTHUMT00000046507.1
Alternative gene names: XLOC_008700; linc-KLF6-2; ENSG00000233117; RP11-67B16.1; ENSG00000233117.1; OTTHUMG00000017572.1; ENSG00000233117.2; LINC00702;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -89.1129 non-coding 
CPAT coding probability 1.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00702:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KLF6-7:3
3.1 lnc-KLF6-7:3
4.0 LINC00702:5
4.1 LINC00702:5
5.0 LINC00702:5
5.1 LINC00702:5
5.2 LINC00702:5