Transcript: LINC00705:1

Basic information

LNCipedia transcript ID: LINC00705:1 
HGNC Gene Symbol: LINC00705    
HGNC Full Gene Name: long intergenic non-protein coding RNA 705
Ensembl Gene ID: ENSG00000225269
Ensembl Transcript ID: ENST00000417883
Location (hg38): chr10:4655427-4662419
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1745 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000417883; ENST00000417883.2; RP11-117P22.2-001; OTTHUMT00000046511.1; NONHSAT011109
Alternative gene names: ENSG00000225269; RP11-117P22.2; ENSG00000225269.2; OTTHUMG00000017575.1; LINC00705;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -73.77 non-coding 
CPAT coding probability 38.56% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00705:1 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AKR1E2-1:1
3.1 lnc-AKR1E2-1:1
4.0 LINC00705:1
4.1 LINC00705:1
5.0 LINC00705:1
5.1 LINC00705:1
5.2 LINC00705:1