Transcript: LINC00707:11

Basic information

LNCipedia transcript ID: LINC00707:11 
LNCipedia gene ID: LINC00707
Location (hg38): chr10:6833648-6840709
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 395 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00018676
Alternative gene names: XLOC_008374; linc-ITIH2-6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -130.9821 non-coding 
CPAT coding probability 1.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00707:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-AL137145.1-6:6
3.1 lnc-AL137145.1-6:6
4.0 LINC00707:11
4.1 LINC00707:11
5.0 LINC00707:11
5.1 LINC00707:11
5.2 LINC00707:11