Transcript: LINC00708:4

Basic information

LNCipedia transcript ID: LINC00708:4 
HGNC Gene Symbol: LINC00708    
HGNC Full Gene Name: long intergenic non-protein coding RNA 708
Ensembl Gene ID: ENSG00000232170
Ensembl Transcript ID: ENST00000454056
Location (hg38): chr10:8259331-8260804
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 365 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00017923; ENST00000454056; ENST00000454056.1; GS1-756B1.2-002; OTTHUMT00000046728.1; NONHSAT011321; ENST00000454056.5
Alternative gene names: XLOC_008725; linc-KIN-4; ENSG00000232170; GS1-756B1.2; ENSG00000232170.1; OTTHUMG00000017645.1; LINC00708; ENSG00000232170.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -185.8942 non-coding 
CPAT coding probability 1.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00708:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIN-2:3
3.1 lnc-KIN-3:3
4.0 LINC00708:4
4.1 LINC00708:4
5.0 LINC00708:4
5.1 LINC00708:4
5.2 LINC00708:4