Transcript: LINC00836:3

Basic information

LNCipedia transcript ID: LINC00836:3 
HGNC Gene Symbol: LINC00836    
HGNC Full Gene Name: long intergenic non-protein coding RNA 836
RefSeq ID: NR_108067
Location (hg38): chr10:25651712-25732935
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1901 bp
Exons: 5
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_108067; NR_108067.1
Alternative gene names: ; LINC00836


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.077 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00836:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GPR158-2:5
4.0 LINC00836:3
4.1 LINC00836:3
5.0 LINC00836:3
5.1 LINC00836:3
5.2 LINC00836:3