Transcript: LINC00838:6

Basic information

LNCipedia transcript ID: LINC00838:6 
LNCipedia gene ID: LINC00838
Location (hg38): chr10:33765802-33771717
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1709 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT012688
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 7.7651 non-coding 
CPAT coding probability 0.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00838:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PARD3-1:7
4.0 LINC00838:6
4.1 LINC00838:6
5.0 LINC00838:6
5.1 LINC00838:6
5.2 LINC00838:6