Transcript: LINC00842:23

Basic information

LNCipedia transcript ID: LINC00842:23 
HGNC Gene Symbol: LINC00842    
HGNC Full Gene Name: long intergenic non-protein coding RNA 842
Ensembl Gene ID: ENSG00000285294
Ensembl Transcript ID: ENST00000614356
RefSeq ID: NR_033957
Location (hg38): chr10:46398362-46453306
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2872 bp
Exons: 4
Sources: Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000614356.1; NR_033957.2
Alternative gene names: ENSG00000285294.1; LINC00842


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 1.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00842:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC00842:23
5.1 LINC00842:23
5.2 LINC00842:23