Transcript: LINC00858:1

Basic information

LNCipedia transcript ID: LINC00858:1 
HGNC Gene Symbol: LINC00858    
HGNC Full Gene Name: long intergenic non-protein coding RNA 858
Ensembl Gene ID: ENSG00000229404
Ensembl Transcript ID: ENST00000415469
RefSeq ID: NR_038220
Location (hg38): chr10:84279980-84294659
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2685 bp
Exons: 6
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000415469; TCONS_00017711; ENST00000415469.1; RP11-124L5.7-001; OTTHUMT00000049127.1; NONHSAT015325; NR_038220; ENST00000415469.5; NR_038220.1
Alternative gene names: ENSG00000229404; XLOC_008537; linc-FAM190B; RP11-124L5.7; ENSG00000229404.1; OTTHUMG00000018638.1; LINC00858; ENSG00000229404.5;

RNA sequence:
AAGATGGCCGAATAGGAACAGCTCCGGTCTACAGCTCCCAGCGTGAGCGACGCAGAAGACGGGTGATTTCTGCATTTCCATCTGAGTTAGGCTTGGCCACAAGAGACAAATTGCAAGGCATGGAGACATTTTTCTAACACTTGAAAATTCTATGCAAGAGCACCAGGCAGCTCAGTCACCTTGTCACTTATCTACTGGGTCACCTTGTTGGCATGGGATGCCAGCCAGGCTTGCAGCTGCTCCATCCTCCCCTGAATTTGTACTTCAGCTTCTCCACTCATGGCCTGCCCTGAGGACTTCATGGTTCAGCATCAGATATGAAGACGACAGCCCTATAGAGACTATTTAACCAGCTTCTAAGGTGGTTAAATATCTTACCAGCCTATGTAAGGCCGAATCCTACTAACAAAGCACTGGTATATGTAATATCCCAGTGGTTTGCTTCTCTAATTGAACCCTGACTACTACAGAAGTCCAGATACCACAGTCTGAGTAGTTCTTTAATCTGCTTATCTGGTGATTCCATCACAAATGGTTCAGTTGGGCAAAAGGCTCCAGTGAAGAGCTGTGAGGCTTATGTATGGGGACTCACCAGGGGCCAGCCCAGGCTGCCCACAAGACCATGAGCCACCCTGTGACTGAATGAAGTGGAGAGAAGGGAAAGTAGTTAAGAAATCAAGAAAAGTGTCTTTCAGCACCATGGCCAGAAGTTGTGCCACAGAATTGGAACAGGGAAACCCAGAGAGCCAGTGCTGTCCTAGTCCTAGTGCTGAATGATCCCATTGGTGTCCTTAGAAGGGCTCTGACTTCAGCCCACCAGCAGCATGTGGACTTATAAGCTTTCTAGCAGAGTTGGAGATCCCCAGGAAAAAGAAATCTCTTAAAATGAAATGAAACTTCAATCAACCAAGGCTTTCTAGCCTGATGTGAGTTGTCTTTACACACATATACCTTTTTAACAAAGAAGAAGAAAAGAATGGACATTGATAGAACTTGCATTCTGTGTTCATCACCAGGATAGTTGCTTTATAAATATCATTTTGTTTTTAGTCACAACCCAATGCAGCATTTTCCTTACTGACAAAGAACCTGAGGCATGGAGAATTTAAGCAACTCCCTGAAGGCCACCCAGCTAATCAGCAGTGGGAAAAGAATTTAATTCTAGATCTTTCATTCTAAAGCCCAGCTCCTTACACACGTTGGATGCTACTATTTCCAAAATGTCAACAACACTTTGGACTATCAACCTGTCTAAAGAGTATTTGAAGCAGTGATGCAGGCCTCTGAAGGAAAAGGTGCACATTTTCAACAATAAAAGAGAGACATTCCTTTAGTGTATCTCCACATTCCCTGAAGGGGAGCTGGAATGACATGACGGACTTGGCCTCAGGGCCCCAAGCCTTCCCTGTTGCAGTCTTCATGACACTCCTCAGAAGCAGCAACTCCAGCCATGTCTGGAACCATTCCTTACCAGACAGGAGGATATCATGGCCTCAACTCATGATCTGTACCAAGCCAAACCTCTTTTGGGGTACCCACCAAGCCTCAGGCCTCACCTTCTCTGCCCTGTTGTCCCTGCCCATCTGTCCTGGTTTTCTACTAGTTTCCACTACTGGACACTTGTCTGAGGCTGGGTCCCCACCTGGATCTTGTGGCCTCTTGCCCAGGGCTTGGAGGGAAGCTGCTCCCACACTTGAAGATGACAGCTGAGCATGGTCCTTTGTGGGCGTGCTGTCAGGAAGATGACAGTGCAATCTGTTTAATGTGCCAGTTGTCTCTGTGAGTCCCTCATCCGGATGAGCACTTGTCACACCCCTGCAGAGCCCCAGCTGGTTCTTAGAGAGGTGCTCCAGCTCTGTGATTACCTAATCTGGCTTCCCAATCTATCCCACAATGTGTCATTGCTGAGGTCCCTGTGGGTCTTGCAGATAAACTTGCTACAGTCATCCTACACAAAAAAGAAGCTCGTTATCATGAAACCGGCCTGCTTTTTAGCTCCTGGGCCCTAACTCACCCCAGATTGCTGCCAGCTCTTTTGTTTTCCCACTTAGACCAAAGGGATTGAGAAGCTTTCCCATTCCTTGGAGCTGCCACCCTCCATTCTAAGGCAGTCTCCCCCTTCACCCTGCTTGCTGCACCCCAGATGCTGCAAGGCCCATGTGCTGTTTTTGACTTCAGTACTTCAGATTGCTGTGGGAACACAGGAGGCAGCAGCCAGATGAGAAATTGAGTCTGACTCTGGAGTATTATAAAGTCCTTATAGTTACTGGCATTAGGTATAGGGTCTGTATTATTAAAGAGAAATTATTCACCAAACACTTGTTAAAAATGGCAAGACAGTTTATTTAAGAGCATTGCAATAGGTAAGTGCTATGGTCTCAATGTTTGTGTCTCCCTCAAATTCATAAGTTGAAACTTCACTTCCAAGATGAAGGAATTAGGAGGTGGGCACTTTAAGGGATGATTATGTCATAGGCCAGAGCCCTCATGAACGAGATCAGTGCCCTTCTAAAAGAGGCATTGGGAGAGACCCCTCACCTTTTCCATCATATGAGGACACAGCCAGGAAGCATCATCCACGAACCAGAAAATTGGCCCTTACCAGACACTGAATCTGCTGATGTCCTGACCATGGACTTCTGAGCCTTCTGAACTGTGAGAGATAAATTTCTGTTGTTTATAAGC