Transcript: LINC00863:5

Basic information

LNCipedia transcript ID: LINC00863:5 
HGNC Gene Symbol: LINC00863    
HGNC Full Gene Name: long intergenic non-protein coding RNA 863
Ensembl Gene ID: ENSG00000224914
Ensembl Transcript ID: ENST00000439559
Location (hg38): chr10:87342736-87357882
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 3287 bp
Exons: 5
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT015423; ENST00000439559.2
Alternative gene names: ENSG00000224914.2; LINC00863; ; ENSG00000224914.3


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 37.0238 non-coding 
CPAT coding probability 78.03% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00863:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM22D-1:6
4.0 LINC00863:5
4.1 LINC00863:5
5.0 LINC00863:5
5.1 LINC00863:5
5.2 LINC00863:5