Transcript: LINC00865:3

Basic information

LNCipedia transcript ID: LINC00865:3 
LNCipedia gene ID: LINC00865
RefSeq ID: NR_038382
Location (hg38): chr10:89829493-89840861
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4289 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT015546; NR_038382; NR_038382.1
Alternative gene names: ; LINC00865


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 1 coding 
Peptide Confidence Reading frame
TVSAFVGDR 100% antisense-2
Lee translation initiation sites 0 non-coding 
PhyloCSF score -72.7017 non-coding 
CPAT coding probability 0.93% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00865:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIF20B-2:5
4.0 LINC00865:3
4.1 LINC00865:3
5.0 LINC00865:3
5.1 LINC00865:3
5.2 LINC00865:3