Transcript: LINC00865:4

Basic information

LNCipedia transcript ID: LINC00865:4 
HGNC Gene Symbol: LINC00865    
HGNC Full Gene Name: long intergenic non-protein coding RNA 865
Ensembl Gene ID: ENSG00000232229
Ensembl Transcript ID: ENST00000448963
Location (hg38): chr10:89829510-89840861
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4272 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000448963; ENST00000448963.1; RP11-248C1.2-001; OTTHUMT00000049333.1; ENST00000448963.5
Alternative gene names: ENSG00000232229; RP11-248C1.2; ENSG00000232229.1; OTTHUMG00000018726.1; LINC00865; ENSG00000232229.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -72.7017 non-coding 
CPAT coding probability 0.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00865:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-KIF20B-2:1
3.1 lnc-KIF20B-2:1
4.0 LINC00865:4
4.1 LINC00865:4
5.0 LINC00865:4
5.1 LINC00865:4
5.2 LINC00865:4