Transcript: LINC00882:19

Basic information

LNCipedia transcript ID: LINC00882:19 
LNCipedia gene ID: LINC00882
Location (hg38): chr3:106897671-106898268
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 598 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT091009
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 40.3518 non-coding 
CPAT coding probability 3.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00882:19 no no no no

Available literature

  1. Perry (2014), Role of non-coding RNAs in maintaining primary airway smooth muscle cells., Respir. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CBLB-13:1
4.0 LINC00882:19
4.1 LINC00882:19
5.0 LINC00882:19
5.1 LINC00882:19
5.2 LINC00882:19