Transcript: LINC00882:26

Basic information

LNCipedia transcript ID: LINC00882:26 
LNCipedia gene ID: LINC00882
Location (hg38): chr3:106817983-106839667
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1477 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00006584; NONHSAT090999
Alternative gene names: XLOC_003202; linc-CBLB-4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.3048 non-coding 
CPAT coding probability 2.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00882:26 no no no no

Available literature

  1. Perry (2014), Role of non-coding RNAs in maintaining primary airway smooth muscle cells., Respir. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CD47-4:14
3.1 lnc-CBLB-7:14
4.0 LINC00882:26
4.1 LINC00882:26
5.0 LINC00882:26
5.1 LINC00882:26
5.2 LINC00882:26