Transcript: LINC00882:37

Basic information

LNCipedia transcript ID: LINC00882:37 
LNCipedia gene ID: LINC00882
Location (hg38): chr3:107381920-107421339
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 406 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT091050; FPKM1_group_21689_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -177.6246 non-coding 
CPAT coding probability 0.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00882:37 no no no no

Available literature

  1. Perry (2014), Role of non-coding RNAs in maintaining primary airway smooth muscle cells., Respir. Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CD47-3:2
4.0 lnc-CD47-3:2
4.1 LINC00882:37
5.0 LINC00882:37
5.1 LINC00882:37
5.2 LINC00882:37