Transcript: LINC00885:9

Basic information

LNCipedia transcript ID: LINC00885:9 
LNCipedia gene ID: LINC00885
Location (hg38): chr3:196142532-196178101
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 718 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224652.1|ENCT00000299249.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -217.8745 non-coding 
CPAT coding probability 13.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00885:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC00885:9
5.0 LINC00885:9
5.1 LINC00885:9
5.2 LINC00885:9