Transcript: LINC00891:5

Basic information

LNCipedia transcript ID: LINC00891:5 
LNCipedia gene ID: LINC00891
RefSeq ID: NR_034005
Location (hg38): chrX:71697196-71703406
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1064 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_034004; NR_034005; NR_034005.1
Alternative gene names: LINC00891


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 25.8384 non-coding 
CPAT coding probability 38.47% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC00891:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ACRC-1:2
4.0 lnc-ACRC-1:2
4.1 lnc-ACRC-1:2
5.0 lnc-ACRC-1:2
5.1 LINC00891:3
5.2 LINC00891:5