Transcript: LINC00894:36

Basic information

LNCipedia transcript ID: LINC00894:36 
LNCipedia gene ID: LINC00894
Location (hg38): chrX:150223143-150223583
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 220 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00017270; NONHSAT138988
Alternative gene names: XLOC_008083; linc-MAMLD1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -242.0948 non-coding 
CPAT coding probability 17.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00894:36 no no no no

Available literature

  1. Zhang (2018), Downregulation of LINC00894-002 Contributes to Tamoxifen Resistance by Enhancing the TGF-β Signaling Pathway., Biochemistry Mosc.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MAMLD1-1:10
3.1 lnc-MAGEA8-2:10
4.0 LINC00894:36
4.1 LINC00894:36
5.0 LINC00894:36
5.1 LINC00894:36
5.2 LINC00894:36