Transcript: LINC00895:13

Basic information

LNCipedia transcript ID: LINC00895:13 
LNCipedia gene ID: LINC00895
Location (hg38): chr22:19556336-19565200
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 660 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029855; NONHSAT083416
Alternative gene names: XLOC_014297; linc-CLDN5-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.0271 non-coding 
CPAT coding probability 16.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00895:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CLDN5-1:3
3.1 lnc-CLDN5-1:3
4.0 lnc-CLDN5-1:3
4.1 lnc-CLDN5-1:3
5.0 lnc-CLDN5-1:3
5.1 LINC00895:6
5.2 LINC00895:13