Transcript: LINC00896:8

Basic information

LNCipedia transcript ID: LINC00896:8 
HGNC Gene Symbol: LINC00896    
HGNC Full Gene Name: long intergenic non-protein coding RNA 896
Ensembl Gene ID: ENSG00000236499
Ensembl Transcript ID: ENST00000609602
Location (hg38): chr22:20206397-20208524
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2128 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609602.1
Alternative gene names: ENSG00000236499.2; LINC00896


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -55.514 non-coding 
CPAT coding probability 19.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00896:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC007663.1-6:2
4.0 lnc-AC007663.1-6:2
4.1 lnc-AC007663.1-6:2
5.0 lnc-AC007663.1-6:2
5.1 LINC00896:3
5.2 LINC00896:8