Transcript: LINC00899:13

Basic information

LNCipedia transcript ID: LINC00899:13 
HGNC Gene Symbol: LINC00899    
HGNC Full Gene Name: long intergenic non-protein coding RNA 899
Ensembl Gene ID: ENSG00000231711
Ensembl Transcript ID: ENST00000609737
Location (hg38): chr22:46039907-46044064
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4158 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609737.1
Alternative gene names: ENSG00000231711.2; LINC00899;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -13.3832 non-coding 
CPAT coding probability 1.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00899:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C22orf26-2:16
4.0 LINC00899:13
4.1 LINC00899:13
5.0 LINC00899:13
5.1 LINC00899:13
5.2 LINC00899:13