Transcript: LINC00899:8

Basic information

LNCipedia transcript ID: LINC00899:8 
HGNC Gene Symbol: LINC00899    
HGNC Full Gene Name: long intergenic non-protein coding RNA 899
Ensembl Gene ID: ENSG00000231711
Ensembl Transcript ID: ENST00000444890
Location (hg38): chr22:46041009-46044853
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 493 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000444890; ENST00000444890.1; RP11-398F12.1-002; OTTHUMT00000317993.1
Alternative gene names: ENSG00000231711; RP11-398F12.1; ENSG00000231711.1; OTTHUMG00000150406.1; ENSG00000231711.2; LINC00899;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -241.8545 non-coding 
CPAT coding probability 2.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00899:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C22orf26-2:7
3.1 lnc-C22orf26-2:7
4.0 LINC00899:8
4.1 LINC00899:8
5.0 LINC00899:8
5.1 LINC00899:8
5.2 LINC00899:8