Transcript: LINC00900:2

Basic information

LNCipedia transcript ID: LINC00900:2 
LNCipedia gene ID: LINC00900
Location (hg38): chr11:115757452-115760627
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 981 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00019127
Alternative gene names: XLOC_009562; linc-CADM1-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 21.4921 non-coding 
CPAT coding probability 6.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00900:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CADM1-2:2
3.1 lnc-CADM1-2:2
4.0 LINC00900:2
4.1 LINC00900:2
5.0 LINC00900:2
5.1 LINC00900:2
5.2 LINC00900:2