Transcript: LINC00904:1

Basic information

LNCipedia transcript ID: LINC00904:1 
HGNC Gene Symbol: LINC00904    
HGNC Full Gene Name: long intergenic non-protein coding RNA 904
Ensembl Gene ID: ENSG00000271649
Ensembl Transcript ID: ENST00000604453
RefSeq ID: NR_046222
Location (hg38): chr19:34892029-34898943
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 471 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT065636; NR_046222; ENST00000604453.1; NR_046222.1
Alternative gene names: ENSG00000271649.1; LINC00904;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 0.7754 non-coding 
CPAT coding probability 0.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00904:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZNF792-2:2
4.0 LINC00904:1
4.1 LINC00904:1
5.0 LINC00904:1
5.1 LINC00904:1
5.2 LINC00904:1