Transcript: LINC00905:6

Basic information

LNCipedia transcript ID: LINC00905:6 
HGNC Gene Symbol: LINC00905    
HGNC Full Gene Name: long intergenic non-protein coding RNA 905
Ensembl Gene ID: ENSG00000167459
Ensembl Transcript ID: ENST00000397365
Location (hg38): chr19:16033317-16035627
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 466 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT061737; ENST00000397365.3; ENST00000397365.7
Alternative gene names: ENSG00000167459.12; LINC00905; ENSG00000167459.16; FLJ25328


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.3736 non-coding 
CPAT coding probability 2.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC00905:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC004790.1-1:6
4.0 LINC00905:6
4.1 LINC00905:6
5.0 LINC00905:6
5.1 LINC00905:6
5.2 LINC00905:6